Include file permissions in key for cached files (#5901)
Reimplements https://github.com/astral-sh/ruff/pull/3104
Closes https://github.com/astral-sh/ruff/issues/5726
Note that we will generate the hash for a cache key twice in normal
operation. Once to check for the cached item and again to update the
cache. We could optimize this by generating the hash once in
`diagnostics::lint_file` and passing the `u64` into `get` and `update`.
We'd probably want to wrap it in a `CacheKeyHash` enum for type safety.
## Test plan
Unit tests for Windows and Unix.
Manual test with case from issue
```
❯ touch fake.py
❯ chmod +x fake.py
❯ ./target/debug/ruff --select EXE fake.py
fake.py:1:1: EXE002 The file is executable but no shebang is present
Found 1 error.
❯ chmod -x fake.py
❯ ./target/debug/ruff --select EXE fake.py
```