Clean up some obsolete TODOs in run_test and several test files (#119113)
* The TODOs in `test/test_nestedtensor.py` has been mitigated, I keep the issue for reference.
* ~~The TODOs in `test/test_ops_fwd_gradients.py` doesn't apply anymore~~
* The TODOs in `run_test.py` to support disabling C++ tests is probably not going to happen. I have never seen a flaky C++ test that needs to be disabled before.
Pull Request resolved: https://github.com/pytorch/pytorch/pull/119113
Approved by: https://github.com/kit1980
