[BE]: Update flake8 and plugins and fix bugs (#97795)
Update flake8 and flake8-plugins in lintrunner to a modern version. Enables more checks and makes flake8 checks significantly faster. Added a few additional rule ignores that will need to be fixed in the future.
Pull Request resolved: https://github.com/pytorch/pytorch/pull/97795
Approved by: https://github.com/alexsio27444, https://github.com/janeyx99, https://github.com/ezyang
