transformers
Graphormer model for Graph Classification
#20968
Merged

Graphormer model for Graph Classification #20968

sgugger merged 53 commits into huggingface:main from adding-graphormer
clefourrier
sgugger
sgugger commented on 2023-01-03
clefourrier clefourrier marked this pull request as draft 3 years ago
clefourrier
sgugger
clefourrier
ydshieh
clefourrier
ydshieh
clefourrier
clefourrier [FT] First commit for graphormer architecture.
0c495358
clefourrier [FIX] removed test model
cc0d02ff
clefourrier [FIX] import error
97ea66d8
clefourrier [FIX] black and flake
44383a3e
clefourrier [DOC] added paper refs
37830b2d
clefourrier [FIX] [DOC]
3f15e7fe
clefourrier [FIX] black
d3c353e3
clefourrier [DOC] Updated READMEs
698052c7
clefourrier [FIX] Order of imports + rm Tokenizer calls
5882667f
clefourrier [FIX] Moved assert in class to prevent doc build failure
ce57b20a
clefourrier [FIX] make fix-copies
3fc32cff
clefourrier [Doc] update from code review
1300a6f4
clefourrier [FIX] Removed Graphormer from Sequence classification model list
aeb2ae2f
clefourrier [DOC] Added HF copyright to Cython file
8e211a6b
clefourrier [DOC] Fixed comments
1b9f9eb1
clefourrier [FIX] typos in class doc + removed config classes.
8fd82e14
clefourrier [FIX] Removed dependency to fairseq, and replaced all asserts with Ex…
bacf31bf
clefourrier [FIX] Homogeneized initialization of weights to pretrained constructor
a754647c
clefourrier [FIX] [CP] Updated multi_hop parameter to get same results as in orig…
ed9d78c3
clefourrier [DOC] Relevant parameter description in the configuration file
1d099e75
clefourrier [DOC] Updated doc and comments in main graphormer file
676d1b9b
clefourrier [FIX] make style and quality checks
17ca9b9b
clefourrier [DOC] Fix doc format
30f77f59
clefourrier [FIX] [WIP] Updated part of the tests, though still a wip
be5d7445
clefourrier [FIX] [WIP]
968147d8
clefourrier [FIX] repo consistency
a32ab7d2
clefourrier [FIX] Changed input names for more understandability
56e992a3
clefourrier [FIX] [BUG] updated num_classes params for propagation in the model
d0565644
clefourrier simplified collator
650f3041
clefourrier [FIX] Updated tests to follow new naming pattern
31fd907c
clefourrier [TESTS] Updated test suite along with model
89107bc5
clefourrier |FIX] rm tokenizer import
19e72dde
clefourrier [DOC] add link to graphormerdoc
c5c6621a
HuggingFaceDocBuilderDev
clefourrier Changed section in doc from text model to graph model
f33b0fe6
clefourrier
clefourrier clefourrier marked this pull request as ready for review 3 years ago
clefourrier Merge branch 'huggingface:main' into adding-graphormer
c1a05519
clefourrier Merge branch 'huggingface:main' into adding-graphormer
3a9456e4
sgugger
sgugger commented on 2023-01-18
clefourrier Apply suggestions from code review
55ad6778
clefourrier [DOC] Explain algos_graphormer functions
d8bb4853
clefourrier Cython soft import protection
d34fd563
clefourrier Rm call to Callable in configuration graphormer
9959227b
clefourrier [FIX] replaced asserts with Exceptions
3ec3c412
clefourrier
clefourrier commented on 2023-01-18
clefourrier Add org to graphormer checkpoints
a2dc09c4
clefourrier Prefixed classes with Graphormer
83bd6b12
clefourrier Management of init functions
4eb0fb0a
clefourrier format
efd958da
clefourrier fixes
74de759b
clefourrier fix length file
027c01d6
clefourrier Merge branch 'huggingface:main' into adding-graphormer
6ca0834c
clefourrier clefourrier requested a review from sgugger sgugger 3 years ago
clefourrier
sgugger
sgugger approved these changes on 2023-01-19
clefourrier update indent
438ffee7
clefourrier relaunching ci
7cc8156b
clefourrier Errors for missing cython imports
dce7d3b0
clefourrier fix style
372626b7
clefourrier fix style doc
5f9826e1
sgugger sgugger merged 87208a05 into main 3 years ago
sgugger
ydshieh
ydshieh
clefourrier
clefourrier

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