latch
Nextflow V2
#449
Merged
Overview
Commits
44
Changes
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Commits
  • create dynamic nextflow task
    rahuldesai1 committed 2 years ago
  • use pvc placeholder
    rahuldesai1 committed 2 years ago
  • add entrypoint generation
    rahuldesai1 committed 2 years ago
  • write to file
    rahuldesai1 committed 2 years ago
  • download deps + bug fixes
    rahuldesai1 committed 2 years ago
  • fix path to nf binary
    rahuldesai1 committed 2 years ago
  • fix bin dir issue + dump nf logs on error
    rahuldesai1 committed 2 years ago
  • updates
    ayushkamat committed 2 years ago
  • Merge branch 'rahuldesai1/dynamic-nextflow-task' into ayush/private-docker
    ayushkamat committed 2 years ago
  • Merge pull request #442 from latchbio/ayush/private-docker
    rahuldesai1 committed 2 years ago
  • copy files to EFS before running
    rahuldesai1 committed 2 years ago
  • remove prints
    rahuldesai1 committed 2 years ago
  • save state
    ayushkamat committed 2 years ago
  • dur
    ayushkamat committed 2 years ago
  • ignore dangling symlinks when copying root directory to shared
    rahuldesai1 committed 2 years ago
  • update samplesheets
    ayushkamat committed 2 years ago
  • make nextflow runtime resources configurable
    rahuldesai1 committed 2 years ago
  • bug fix
    rahuldesai1 committed 2 years ago
  • cleanup on completion
    rahuldesai1 committed 2 years ago
  • upload .nextflow.log instead of printing
    rahuldesai1 committed 2 years ago
  • Merge pull request #448 from latchbio/rahuldesai1/nf-runtime-resources
    rahuldesai1 committed 2 years ago
  • remove finalzing workflow print statement
    rahuldesai1 committed 2 years ago
  • update version
    rahuldesai1 committed 2 years ago
  • download from nextflow-v2
    rahuldesai1 committed 2 years ago
  • bump ver
    rahuldesai1 committed 2 years ago
  • mount service account token
    rahuldesai1 committed 2 years ago
  • Merge pull request #450 from latchbio/rahuldesai1/nextflow-mount-service-account
    rahuldesai1 committed 2 years ago
  • bump version dev4
    rahuldesai1 committed 2 years ago
  • Merge remote-tracking branch 'origin/main' into rahuldesai1/dynamic-nextflow-task
    rahuldesai1 committed 2 years ago
  • add newline print after subprocess completion
    rahuldesai1 committed 2 years ago
  • Merge remote-tracking branch 'origin/rahuldesai1/dynamic-nextflow-task' into ayush/private-docker
    rahuldesai1 committed 2 years ago
  • Merge pull request #444 from latchbio/ayush/private-docker
    rahuldesai1 committed 2 years ago
  • bump version
    rahuldesai1 committed 2 years ago
  • write samplesheet before copying to efs
    rahuldesai1 committed 2 years ago
  • cwd to shared_dir before execution workflow
    rahuldesai1 committed 2 years ago
  • bumpver
    rahuldesai1 committed 2 years ago
  • .dockerignore + no-sign-requests for nextflow download
    rahuldesai1 committed 2 years ago
  • bump verison again
    rahuldesai1 committed 2 years ago
  • generate nextflow config at registration
    rahuldesai1 committed 2 years ago
  • resolve PR comments
    rahuldesai1 committed 2 years ago
  • whoops
    rahuldesai1 committed 2 years ago
  • resolve Pr comments
    rahuldesai1 committed 2 years ago
  • Merge remote-tracking branch 'origin/main' into rahuldesai1/dynamic-nextflow-task
    rahuldesai1 committed 2 years ago
  • update setup.py
    rahuldesai1 committed 2 years ago
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