Nextflow V2 #449
rahuldesai1
merged
44 commits into
main
from
rahuldesai1/dynamic-nextflow-task
create dynamic nextflow task
12e1eb11
use pvc placeholder
686e1ae6
add entrypoint generation
46298241
write to file
e5c464f2
download deps + bug fixes
aad89342
fix path to nf binary
fccc6ab0
fix bin dir issue + dump nf logs on error
8c348b60
updates
de48345d
Merge branch 'rahuldesai1/dynamic-nextflow-task' into ayush/private-d…
babff428
Merge pull request #442 from latchbio/ayush/private-docker
ddf1a2d4
copy files to EFS before running
a0419b81
remove prints
a3d6c162
save state
eb9d0523
dur
33de6cba
ignore dangling symlinks when copying root directory to shared
5748b57b
update samplesheets
ccca4817
make nextflow runtime resources configurable
58fa25ed
bug fix
39d53fe8
cleanup on completion
1b37c8a8
upload .nextflow.log instead of printing
2ed501ff
Merge pull request #448 from latchbio/rahuldesai1/nf-runtime-resources
e0f08c98
remove finalzing workflow print statement
0e32e058
update version
0812ccbe
download from nextflow-v2
4390a8cc
bump ver
ef60372f
mount service account token
e44b7c98
Merge pull request #450 from latchbio/rahuldesai1/nextflow-mount-serv…
6d6abffd
bump version dev4
44f823fe
Merge remote-tracking branch 'origin/main' into rahuldesai1/dynamic-n…
4ba390ad
add newline print after subprocess completion
6744ebb7
Merge remote-tracking branch 'origin/rahuldesai1/dynamic-nextflow-tas…
7eca9f6f
Merge pull request #444 from latchbio/ayush/private-docker
a2a90b57
bump version
0996d079
write samplesheet before copying to efs
ff5d17a6
cwd to shared_dir before execution workflow
8c4a6a2c
bumpver
47338997
.dockerignore + no-sign-requests for nextflow download
aa02085c
bump verison again
d34b4790
generate nextflow config at registration
8a55aaa6
resolve PR comments
b90adc93
whoops
16adda61
resolve Pr comments
e2c00c9c
Merge remote-tracking branch 'origin/main' into rahuldesai1/dynamic-n…
801bdfb9
update setup.py
162ac15c
Login to write a write a comment.
Login via GitHub