latchbio/latch

Pull Requests Commits

instruct how to generate metadata

kennyworkman committed 2 years ago

9e3fa99c

push so i dont break rahuls stuff

ayushkamat committed 2 years ago

f2636a30

ayushkamat committed 2 years ago

59914b11

ayushkamat committed 2 years ago

34d990fb

ayushkamat committed 2 years ago

0dddb13c

bump dev verison to 22

rahuldesai1 committed 2 years ago

1ff0c2e3

Merge branch 'kenny/nextflow' of github.com:latchbio/latch into kenny/nextflow

ayushkamat committed 2 years ago

bd51e5be

ayushkamat committed 2 years ago

5b708b91

Merge pull request #403 from latchbio/rahuldesai1/generate-nextflow-config

rahuldesai1 committed 2 years ago

Verified 867fc5f5

read json instead of yaml

rahuldesai1 committed 2 years ago

7d06409d

Merge pull request #404 from latchbio/rahuldesai1/nextflow-skipped-tasks

rahuldesai1 committed 2 years ago

Verified f972adc3

resolve PR comments

rahuldesai1 committed 2 years ago

783b0f3e

rahuldesai1 committed 2 years ago

96f1e08a

make override_task_status private

rahuldesai1 committed 2 years ago

97f2b214

regex for parsing pod name

rahuldesai1 committed 2 years ago

e6b26966

allow arr index and retry to be null

rahuldesai1 committed 2 years ago

1a2c1c9b

update task status to SKIPPED in nextflow

rahuldesai1 committed 2 years ago

64155921

add nextflow binary to docker container

rahuldesai1 committed 2 years ago

8b3ff7d4

improved error messaging for default values

rahuldesai1 committed 2 years ago

e3df19f1

add support for nextflow dockerfile cmd

rahuldesai1 committed 2 years ago

851d8936

move validate_snakemake logic

rahuldesai1 committed 2 years ago

d111ac54

ignore nextflow specific tags in yaml loading

rahuldesai1 committed 2 years ago

efc5f0ce

remove NextflowFileParam

rahuldesai1 committed 2 years ago

c30966af

download nf deps if they don't exist

rahuldesai1 committed 2 years ago

3e35aa44

add support for nextflow config generation

rahuldesai1 committed 2 years ago

fbc41040

ayushkamat committed 2 years ago

5552507b

fixes for bronte

ayushkamat committed 2 years ago

c450a975

ayushkamat committed 2 years ago

dfe10c31

ayushkamat committed 2 years ago

4296b3ac

Merge branch 'main' of github.com:latchbio/latch into kenny/nextflow

ayushkamat committed 2 years ago

b4e0c176

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