latchbio/latch

Pull Requests Commits

version + CHANGELOG.md

rahuldesai1 committed 2 years ago

c9196c03

Merge pull request #375 from latchbio/rahuldesai1/snakemake/add-env-config

rahuldesai1 committed 2 years ago

Verified 2f86bd7b

add docs for Snakemake container support

rahuldesai1 committed 2 years ago

f9343c16

use_containers -> use_container

rahuldesai1 committed 2 years ago

27c7f168

add defaults for env config

rahuldesai1 committed 2 years ago

0aa484a2

update pyproject.toml

ayushkamat committed 2 years ago

e287386c

update black version and re-format

rahuldesai1 committed 2 years ago

79073334

add toggle for using conda and container envs

rahuldesai1 committed 2 years ago

208aa4b3

Merge pull request #374 from latchbio/rahuldesai1/private-docker-repo-support

rahuldesai1 committed 2 years ago

Verified aed275e5

fix DockerMetadata dataclass definition

rahuldesai1 committed 2 years ago

9e83a2ba

make DockerMetadata a dataclass

rahuldesai1 committed 2 years ago

b86f62ed

remove unnecessary imports

rahuldesai1 committed 2 years ago

510b9878

use latch_metadata for docker credentials

rahuldesai1 committed 2 years ago

f1d13ae4

feat: add support for logging into private docker registries

rahuldesai1 committed 2 years ago

5abd6e0c

Merge pull request #373 from latchbio/rahuldesai1/output-file-resolution-fix

rahuldesai1 committed 2 years ago

Verified 8defc7c9

fix: use target job file name instead of param name to resolve upstream nodes

rahuldesai1 committed 2 years ago

de0b5f99

rahuldesai1 committed 2 years ago

Verified 33f18636

Update CHANGELOG.md

rahuldesai1 committed 2 years ago

Verified f36f060b

Merge pull request #372 from latchbio/rahuldesai1/latch-develop-jit-name-fix

rahuldesai1 committed 2 years ago

Verified d6cfd1bf

fix: add jit_register suffix to workflow name

rahuldesai1 committed 2 years ago

1f1eeb46

Merge pull request #371 from latchbio/rahuldesai1/snakemake-multi-contianer

rahuldesai1 committed 2 years ago

Verified 02407ef3

rahuldesai1 committed 2 years ago

9218838d

convert single quotes to double quotes in shell cmd

rahuldesai1 committed 2 years ago

9b20cd7a

resolve PR comments

rahuldesai1 committed 2 years ago

b809e7e3

use container_workdir as workdir if supplied

rahuldesai1 committed 2 years ago

ff255ac4

feat: support container directive using docker runtime

rahuldesai1 committed 2 years ago

4ff6d1cc

Merge pull request #369 from latchbio/rahuldesai1/snakemake-targetjob-bug-fix

rahuldesai1 committed 2 years ago

Verified 7875fa36

ver + changelog

ayushkamat committed 2 years ago

311fe164

Merge pull request #370 from latchbio/ayush/open-wf

ayushkamat committed 2 years ago

Verified dc51ed6b

open workflows after register

ayushkamat committed 2 years ago

038813be

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