latchbio/latch

Pull Requests Commits

add screenshots to Snakemake lifecycle page

rahuldesai1 committed 2 years ago

1788d14d

better organization for the metadata docs

rahuldesai1 committed 2 years ago

9048c95b

update quickstart in Snakemake docs

rahuldesai1 committed 2 years ago

18cf8894

version + changelog

rahuldesai1 committed 2 years ago

02cbb2d5

Merge pull request #381 from latchbio/rahuldesai1/snakemake/nested-file-paths

rahuldesai1 committed 2 years ago

Verified 1ce8761a

rahuldesai1 committed 2 years ago

230af84e

add type checking for Snakemake metadata defaults

rahuldesai1 committed 2 years ago

3aafd6ca

resolve pr comments

rahuldesai1 committed 2 years ago

c3ef8c00

disable support for lists containing LatchFile/LatchDir in generate-metadata

rahuldesai1 committed 2 years ago

374be13e

disable support for lists containing LatchFile/LatchDir

rahuldesai1 committed 2 years ago

271208b3

update tutorial to include new metadata generation code

rahuldesai1 committed 2 years ago

ef952de0

add none default check to metadata post-init

rahuldesai1 committed 2 years ago

f0a2c536

resolve PR comments

rahuldesai1 committed 2 years ago

35636667

Merge remote-tracking branch 'origin/main' into rahuldesai1/snakemake/nested-file-paths

rahuldesai1 committed 2 years ago

78d7a8a4

Merge pull request #382 from latchbio/rahuldesai1/snakemake/add-cores-argument

rahuldesai1 committed 2 years ago

Verified 480e3a6f

Merge remote-tracking branch 'origin/main' into rahuldesai1/snakemake/add-cores-argument

rahuldesai1 committed 2 years ago

b4963d41

Merge pull request #383 from latchbio/rahuldesai1/snakemake/gpu-support

rahuldesai1 committed 2 years ago

Verified 1cd414fa

inline mb -> gib conversion

rahuldesai1 committed 2 years ago

2d52b8d6

rahuldesai1 committed 2 years ago

e44aaa28

udpate snakemake metadata docs

rahuldesai1 committed 2 years ago

02f10703

update environments doc to remove params

rahuldesai1 committed 2 years ago

0a0bf414

Merge remote-tracking branch 'origin/main' into rahuldesai1/snakemake/nested-file-paths

rahuldesai1 committed 2 years ago

2736aa7f

rahuldesai1 committed 2 years ago

444bedce

add docs and support for large instances

rahuldesai1 committed 2 years ago

1a2a7065

add gpu support for Snakemake when not running in containers

rahuldesai1 committed 2 years ago

5e995d36

add cores argument to SnakemakeMetadata

rahuldesai1 committed 2 years ago

27425ad2

cleanup config updating logic

rahuldesai1 committed 2 years ago

81d9080a

rahuldesai1 committed 2 years ago

85d1f5f6

add defaults back

rahuldesai1 committed 2 years ago

020c5e38

add guard around input file list size

rahuldesai1 committed 2 years ago

74067181

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